Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
TGCT rs13986 chr2:3483181 C/T 1.99E-5 133 40.57 66.17 25.32 KM Plot
TGCT rs140837060 chr16:67662815 T/A 0 133 46.07 24.1 0.57 KM Plot
TGCT rs141755340 chr5:74598752 C/G 1.62E-5 130 45.1 28.67 9.27 KM Plot
TGCT rs142791246 chr7:127787226 TTG/T 1.8E-9 134 43.68 37.32 12.55 KM Plot
TGCT rs143027079 chr16:67582104 G/A 0 133 46.07 24.1 0.57 KM Plot
TGCT rs143091564 chr2:121951956 G/GT 1.0E-8 134 41.27 60.63 20.6 KM Plot
TGCT rs143428028 chr2:221243458 TTTG/T 1.96E-5 134 45.47 16.82 94.85 KM Plot
TGCT rs143624083 chr2:99841659 GGGAA/G 7.64E-5 133 42.27 56.7 34.7 KM Plot
TGCT rs143875179 chr16:67606308 G/A 0 133 46.07 24.1 0.57 KM Plot
TGCT rs144098648 chr5:1822976 AT/A 9.15E-6 128 43.68 43.9 24.73 KM Plot
TGCT rs144196392 chr16:67633110 C/G 0 133 46.07 24.1 0.57 KM Plot
TGCT rs144320092 chr6:28347442 GGTCTT/G 0 133 46.07 29.65 0.57 KM Plot
TGCT rs144880514 chr12:129264877 TTTC/T 2.57E-5 129 42.03 42.27 21.75 KM Plot
TGCT rs145297495 chr16:67581660 G/A 0 133 46.07 24.1 0.57 KM Plot
TGCT rs145545670 chr8:103094491 C/T 0.000112 134 42.03 36.68 48.45 KM Plot